Information for 21-ATCDAGCTTCTTCATG (Motif 31)

C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T T C A G C G T A G T C A A T C G C T G A C G T A C T A G G T A C C G A T G A C T C T A G C G T A C G A T
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.769
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 19.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj2/MA0614.1/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:ATCDAGCTTCTTCATG
-------TTGTTTAC-
 C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATCDAGCTTCTTCATG---
----NNCTNAATTATGANN
 C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:ATCDAGCTTCTTCATG
----------GTCATN
 C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATCDAGCTTCTTCATG
-----GHATATKCAT-
 C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATCDAGCTTCTTCATG
--CAAGCTT-------
 C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ATCDAGCTTCTTCATG-----
------CTTTGTTATGCAAAT
 C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:ATCDAGCTTCTTCATG
-----GAATATTCAT-
 C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ATCDAGCTTCTTCATG-----
---NAGTTTCABTHTGACTNW
 C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

FOXF2/MA0030.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:ATCDAGCTTCTTCATG----
------NTTGTTTACGTTNN
 C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G

PB0108.1_Atf1_2/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ATCDAGCTTCTTCATG-
---NTTATTCGTCATNC
 C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G A C G T
A C G T A C G T A C G T C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C