Information for 10-GGGAAGCTAGCAG (Motif 19)

T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G
Reverse Opposite:
A T G C G C A T T C A G G A T C G A C T C T G A A T C G A G T C G A C T A G C T A G T C G A T C A T G C
p-value:1e-10
log p-value:-2.397e+01
Information Content per bp:1.636
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.32%
Number of Background Sequences with motif299.2
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets44.4 +/- 22.0bp
Average Position of motif in Background50.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGAAGCTAGCAG---
GGGRAARRGRMCAGMTG
 A C G T T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G A C G T A C G T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GGGAAGCTAGCAG
NNNNGGGGGAAGANGG---
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGGAAGCTAGCAG
-NGAAGC------
 T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGGAAGCTAGCAG
---AAGCTTG---
 T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GGGAAGCTAGCAG-
---AGGGTAACAGC
 T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G A C G T
A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAGCTAGCAG
TGGCAGNCTGCCAG
 A C G T T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GGGAAGCTAGCAG
AAGGKGRCGCAGGCA-
 A C G T A C G T A C G T T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----GGGAAGCTAGCAG
GGGCGGGAAGG------
 A C G T A C G T A C G T A C G T T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GGGAAGCTAGCAG-----
---ADGGYAGYAGCATCT
 T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GGGAAGCTAGCAG
ACCGGAAG-------
 A C G T A C G T T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T