Information for 3-AGACGGGCGGCGG (Motif 5)

C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C A G T C A C T G A G T C A T G C A G T C A C T G A G C T A G T C A G C T
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 19.8bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGACGGGCGGCGG---
-GGGNGGGGGCGGGGC
 C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGACGGGCGGCGG----
NNNAAGGGGGCGGGNNN
 C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGACGGGCGGCGG---
NAGANTGGCGGGGNGNA
 A C G T C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGACGGGCGGCGG---
-----GGGGGCGGGGC
 C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGACGGGCGGCGG----
-----GGGGGCGGGGCC
 C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGACGGGCGGCGG---
----RGKGGGCGGAGC
 C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGACGGGCGGCGG-
NNTNAGGGGCGGNNNN
 A C G T A C G T C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGACGGGCGGCGG
CCAGACRSVB-----
 A C G T A C G T C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGACGGGCGGCGG
-----GGGGGGGG
 C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGACGGGCGGCGG---
-GGGGGGGGGGGGGGA
 C T G A A C T G C T G A A G T C C T A G A T C G A C T G A G T C A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A