Information for 3-TGGCGACACC (Motif 4)

C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C
Reverse Opposite:
A C T G A T C G C G A T A C T G A G C T A T G C C T A G A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.841
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif116.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets49.1 +/- 23.0bp
Average Position of motif in Background44.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TGGCGACACC-----
NNGGCGACACCTCNNN
 A C G T C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGGCGACACC---
-GGCCACACCCAN
 C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C A C G T A C G T A C G T
A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGGCGACACC--
-GGCCACACCCA
 C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C A C G T A C G T
A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGGCGACACC--
--GCCACACCCA
 C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C A C G T A C G T
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGGCGACACC---
-GGCCACRCCCMK
 C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C A C G T A C G T A C G T
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGGCGACACC-
---TGACACCT
 C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C A C G T
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGGCGACACC-
ATGACGTCAYYN
 A C G T C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C A C G T
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGCGACACC---
-GGACACACCCCC
 C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C A C G T A C G T A C G T
A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGGCGACACC-----
NRGCCCCRCCCHBNN
 C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

CRE(bZIP)/Promoter/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGCGACACC-
GTGACGTCACCG
 A C G T C G A T A C T G T C A G G A T C T A C G T C G A A G T C C G T A A T G C A G T C A C G T
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G