Information for 11-TCTGCTAGCA (Motif 21)

A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A
Reverse Opposite:
G A C T T C A G T A G C A G C T C T G A C A T G T G A C C T G A T C A G T G C A
p-value:1e-6
log p-value:-1.563e+01
Information Content per bp:1.659
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.34%
Number of Background Sequences with motif1105.6
Percentage of Background Sequences with motif2.30%
Average Position of motif in Targets39.0 +/- 26.9bp
Average Position of motif in Background48.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCTGCTAGCA---
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A A C G T A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTGCTAGCA--
-CTTCTGGGAAA
 A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A A C G T A C G T
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCTAGCA---
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCTGCTAGCA
-CTGCCCGCA
 A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCTAGCA---
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCTGCTAGCA-
--GGTTGGCAT
 A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCTGCTAGCA-------
-CTACTAGGATGTNNTN
 A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCTAGCA
VBSYGTCTGG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCTGCTAGCA
GCTTCC----
 A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCTGCTAGCA-----
--TTCTAGAACGTTC
 A C G T A G T C G A C T A C T G G T A C G A C T T C G A A T C G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C