Information for 8-CTTAATCGCG (Motif 15)

T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G
Reverse Opposite:
G T A C T C A G T A G C A C T G G T C A A C G T A G C T C T G A T G C A A C T G
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.675
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif319.7
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets53.1 +/- 23.1bp
Average Position of motif in Background51.2 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTAATCGCG----
NNTAATCCNGNCNN
 T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G A C G T A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTTAATCGCG
-TTAATCCG-
 T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTTAATCGCG
CTTAATCCC-
 T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTTAATCGCG
-TTAATCCC-
 T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTTAATCGCG
-TTAATCCT-
 T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTTAATCGCG---
CCTTAATNGNTTTT
 A C G T T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTTAATCGCG
NYTAATCCYB
 T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTTAATCGCG---
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

Hmx1/MA0896.1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTTAATCGCG---
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTTAATCGCG---
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A C G T T G A C A C G T G A C T T C G A T G C A C A G T T G A C A T C G A G T C C A T G A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T