Information for 4-RGAAAACTGAGATCTA (Motif 6)

C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
Reverse Opposite:
A G C T C T G A A C T G G C T A A G C T A G T C C G A T A G T C C G T A A T C G A C G T A C G T A C G T C G A T A G T C A G T C
p-value:1e-11
log p-value:-2.637e+01
Information Content per bp:1.733
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 17.1bp
Average Position of motif in Background68.8 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:RGAAAACTGAGATCTA
-GWAAYHTGABMC---
 C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:RGAAAACTGAGATCTA
-GWAAYHTGAKMC---
 C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RGAAAACTGAGATCTA
---AAGGTGTKAA---
 C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RGAAAACTGAGATCTA
---AAGGTGTGAA---
 C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RGAAAACTGAGATCTA
---AAGGTGTGAAAAT
 C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:RGAAAACTGAGATCTA
----AGGTGTGAAM--
 C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:RGAAAACTGAGATCTA
----AGGTGTGA----
 C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---RGAAAACTGAGATCTA
TAACGACACGTGC------
 A C G T A C G T A C G T C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RGAAAACTGAGATCTA
--NNNANTGA------
 C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:RGAAAACTGAGATCTA
----AGGTGTGA----
 C T A G A C T G C G T A G T C A C G T A T C G A A T G C A C G T A C T G C G T A A C T G T C G A C A G T T A G C A G C T T C G A
A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T