Information for 2-AATAGGGAGCCAT (Motif 3)

C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T C G T A A C G T A C G T
p-value:1e-13
log p-value:-3.186e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 21.8bp
Average Position of motif in Background35.5 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----AATAGGGAGCCAT--------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AATAGGGAGCCAT----
AAAAATGGCGCCATTTTT
 A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AATAGGGAGCCAT
----CGGAGC---
 C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATAGGGAGCCAT---
AAAATGGCGCCATTTT
 C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AATAGGGAGCCAT
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AATAGGGAGCCAT
---AGCGCGCC--
 C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AATAGGGAGCCAT
CATACAATACGAAATAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A A C G T

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AATAGGGAGCCAT-
--TTTGGCGCCAAA
 C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AATAGGGAGCCAT
CCAAAAATAG--------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AATAGGGAGCCAT-
NNTGTAGGTAGCANNT
 A C G T A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T