Information for 17-CYSCSTGASGGSWRGC (Motif 23)

A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A T G C A G T C A G T C A T G C A C G T A G T C C G T A A T G C C T A G A T C G C T G A A C T G
p-value:1e-6
log p-value:-1.550e+01
Information Content per bp:1.828
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.3 +/- 23.5bp
Average Position of motif in Background62.0 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CYSCSTGASGGSWRGC
--GCCTCAGGGCAT--
 A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CYSCSTGASGGSWRGC
ATTGCCTGAGGCGAA--
 A C G T A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CYSCSTGASGGSWRGC
--SCCTSAGGSCAW--
 A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CYSCSTGASGGSWRGC
ATTCCCTGAGGGGAA--
 A C G T A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CYSCSTGASGGSWRGC
-TGCCCNGGGGCA---
 A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CYSCSTGASGGSWRGC
CTTCGTGGGGGGTC--
 A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CYSCSTGASGGSWRGC
CACCCCCGGGGGGG----
 A C G T A C G T A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CYSCSTGASGGSWRGC
GCTTCGTGGGGGGTCT-
 A C G T A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CYSCSTGASGGSWRGC
-TGCCCTNGGGCA---
 A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CYSCSTGASGGSWRGC
TTGCCCTAGGGCAT--
 A G T C A G C T A T G C A G T C A T C G A C G T A C T G T G C A A T C G A C T G A C T G A T C G C G A T C T A G A C T G A G T C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T