Information for 5-GATGCACAGAGCA (Motif 13)

C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A
Reverse Opposite:
A G C T A C T G A G T C A G C T A T G C A C G T A T C G G C A T A C T G A G T C G T C A A C G T A G T C
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.783
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif65.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets44.5 +/- 26.3bp
Average Position of motif in Background47.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GATGCACAGAGCA
----CACAGN---
 C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GATGCACAGAGCA-
GCCGCGCAGTGCGT
 C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GATGCACAGAGCA
------CGGAGC-
 C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GATGCACAGAGCA--
CGAAGCACACAAAATA
 A C G T C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GATGCACAGAGCA
--------CAGCC
 C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GATGCACAGAGCA-
AGATGKDGAGATAAG
 A C G T C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GATGCACAGAGCA
--GGAACAAAGR-
 C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GATGCACAGAGCA
TGGGGCAAAGGTCA
 A C G T C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GATGCACAGAGCA
-----ACAAAG--
 C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GATGCACAGAGCA
CCAGGAACAG----
 A C G T C T A G T G C A A C G T T A C G T A G C C G T A A T G C C G T A A T C G C T G A A C T G G T A C T C G A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T