Information for 4-GGAGCCATAGCAGGTT (Motif 6)

A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A G T C A G T C
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 18.1bp
Average Position of motif in Background18.8 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.75
Offset:-9
Orientation:reverse strand
Alignment:---------GGAGCCATAGCAGGTT
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGAGCCATAGCAGGTT
-GAGSCCGAGC-----
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGAGCCATAGCAGGTT-
-----CACAGCAGGGGG
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GGAGCCATAGCAGGTT-
--------AACAGGTGT
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCATAGCAGGTT
CGGAGC-----------
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GGAGCCATAGCAGGTT---
-------SDGCAGGTGCNS
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGAGCCATAGCAGGTT
NGTTGCCATGGCAA---
 A C G T A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGAGCCATAGCAGGTT
--TNCCATATATGG--
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GGAGCCATAGCAGGTT-
--GAGCACAGCAGGACA
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PLAG1/MA0163.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GGAGCCATAGCAGGTT
GGGGCCCAAGGGGG--
 A C T G A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T