Information for 1-CCCYCTGGGAGGCCCA (Motif 1)

A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G C T A G A C T G A T G C G T A C A C G T A G T C A G T C A G T C C G T A A T C G T C G A C T A G T C A G A C T G
p-value:1e-18
log p-value:-4.362e+01
Information Content per bp:1.849
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 23.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCYCTGGGAGGCCCA
CACCCCCGGGGGGG----
 A C G T A C G T A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCYCTGGGAGGCCCA
CCCCCCCGGGGGGGT---
 A C G T A C G T A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCYCTGGGAGGCCCA
CCCCCCCGGGGGGGT---
 A C G T A C G T A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCYCTGGGAGGCCCA
---CGTGGGTGGTCC-
 A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

Znf423/MA0116.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCYCTGGGAGGCCCA
GCACCCCTGGGTGCC---
 A C G T A C G T A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCYCTGGGAGGCCCA
TCCCCTGGGGAC----
 A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCYCTGGGAGGCCCA
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCYCTGGGAGGCCCA
RGSMTBCTGGGAAAT---
 A C G T A C G T A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCYCTGGGAGGCCCA
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCYCTGGGAGGCCCA
NGTCCCNNGGGA------
 A C G T A C G T A G T C A G T C A G T C A G C T A T G C A C G T A C T G A C T G A C T G C G T A A C T G A T C G A G T C A G T C A G T C C G T A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T