Information for 4-AGWCATTTTTTTDTGG (Motif 4)

T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G
Reverse Opposite:
A G T C G T A C C G T A G C T A C G T A C T G A C T G A C G T A C G T A C G T A G T C A A C G T C A T G C G T A A G T C A C G T
p-value:1e-13
log p-value:-3.045e+01
Information Content per bp:1.699
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.04%
Number of Background Sequences with motif16.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets34.1 +/- 19.1bp
Average Position of motif in Background44.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0116.1_Elf3_2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AGWCATTTTTTTDTGG---
--GNATTTTTTTTTTGANC
 T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AGWCATTTTTTTDTGG--
----TTTTTTTTCNNGTN
 T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0186.1_Tcf3_2/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGWCATTTTTTTDTGG---
----NNTTTNTTTTNGNNN
 T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGWCATTTTTTTDTGG---
--NNNNTTTTTTTTTNAAC
 T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:AGWCATTTTTTTDTGG-
-------NTTTTATTGG
 T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:AGWCATTTTTTTDTGG-
-------TTTTTATTGG
 T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:AGWCATTTTTTTDTGG---
--------TTTTATGGCTN
 T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AGWCATTTTTTTDTGG-
-------NTTTTATTGG
 T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGWCATTTTTTTDTGG
--CCATTGTTTT----
 T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGWCATTTTTTTDTGG----
----NNANTTTTATTGGNNN
 T C G A T A C G G C A T G A T C G T C A A C G T A C G T C G A T G A C T A G C T A G C T A C G T C A G T C G A T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G