Information for 12-TGTGTATGTGTCTWTA (Motif 18)

A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A
Reverse Opposite:
A G C T C T G A G C A T C T G A T A C G C T G A A G T C C G T A G T A C G C T A A G C T C T G A A G T C C T G A G T A C C T G A
p-value:1e-6
log p-value:-1.394e+01
Information Content per bp:1.670
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif31.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.8 +/- 32.0bp
Average Position of motif in Background44.9 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTATGTGTCTWTA--
NNTGTTCTTTTTTGTTTACT
 A C G T A C G T A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGTGTATGTGTCTWTA
YATGCATATRCATRT---
 A C G T A C G T A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGTGTATGTGTCTWTA
---GAATGTTTGTTT-
 A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A
A C G T A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGTGTATGTGTCTWTA
TGTTTATTT-------
 A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGTGTATGTGTCTWTA-
-----NTGTTTAYATWW
 A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTATGTGTCTWTA
ANTCCTTTGTCTNNNN-----
 A C G T A C G T A C G T A C G T A C G T A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGTGTATGTGTCTWTA
--TGTATATATATACC
 A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A
A C G T A C G T C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTATGTGTCTWTA
NNGCGTGTGTGCNGCN-
 A C G T A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGTGTATGTGTCTWTA
NNNNTTTGTTTACNNT
 A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----TGTGTATGTGTCTWTA
TTCATTTGCATAT-------
 A C G T A C G T A C G T A C G T A G C T C A T G A G C T C T A G A G C T C T G A C G A T A C T G C G A T A C T G A G C T A T G C A G C T C G A T A G C T C T G A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T