Information for 5-GCAAATCCCCAGA (Motif 8)

C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A
Reverse Opposite:
A C G T A T G C A G C T A C T G C T A G A T C G T C A G C T G A C G A T A C G T A C G T A C T G G T A C
p-value:1e-12
log p-value:-2.963e+01
Information Content per bp:1.768
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.6 +/- 12.0bp
Average Position of motif in Background48.1 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCAAATCCCCAGA
GGAAATTCCC---
 C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAAATCCCCAGA
GGGAAATCCCCN--
 A C G T C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCAAATCCCCAGA
GGAAATTCCC---
 C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCAAATCCCCAGA
-SSAATCCACANN
 C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCAAATCCCCAGA
GGAAATCCCC---
 C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCAAATCCCCAGA-
AGGCTAATCCCCAANG
 A C G T A C G T C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PH0139.1_Pitx3/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCAAATCCCCAGA
GNNAGCTAATCCCCCN-
 A C G T A C G T A C G T A C G T C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCAAATCCCCAGA
TCCAATCCACA--
 C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAAATCCCCAGA
GGAAANCCCC---
 C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCAAATCCCCAGA-
---ATTTCCAAGAA
 C A T G A G T C G T C A C G T A C G T A A G C T A G T C A T G C G A T C G T A C C T G A T A C G G T C A A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A