Information for 6-GCTGGGTKGCCCCTCT (Motif 9)

C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T
Reverse Opposite:
C G T A A T C G C G T A C T A G A C T G A C T G A C T G A G T C G T C A C G T A A G T C A G T C G A T C G T C A A C T G G A T C
p-value:1e-10
log p-value:-2.377e+01
Information Content per bp:1.750
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.2 +/- 25.0bp
Average Position of motif in Background50.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCTGGGTKGCCCCTCT-
-----SCTGTCAVTCAV
 C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GCTGGGTKGCCCCTCT
------TTCCCCCTAC
 C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCTGGGTKGCCCCTCT
----GSCTGTCACTCA
 C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T
A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTGGGTKGCCCCTCT
CGTGGGTGGTCC----
 C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GCTGGGTKGCCCCTCT--
-------AGCCACTCAAG
 C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCTGGGTKGCCCCTCT-
-----NCTGTCAATCAN
 C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GCTGGGTKGCCCCTCT-
-------AASCACTCAA
 C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCTGGGTKGCCCCTCT
-AGGGGATTCCCCT--
 C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCTGGGTKGCCCCTCT
TTGGGGGCGCCCCTAG
 C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GCTGGGTKGCCCCTCT
------AAGACCCYYN
 C A T G A G T C C A G T C T A G A C T G T A C G G C A T A C G T A C T G G T A C A G T C G T A C A G T C A C G T A T G C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C