Information for 14-CGTGCACTCC (Motif 42)

A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A A C T G A C G T A C T G A G T C C G T A A G T C A C T G
p-value:1e-2
log p-value:-5.585e+00
Information Content per bp:1.961
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.2 +/- 28.9bp
Average Position of motif in Background45.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGTGCACTCC-
AGATGCAATCCC
 A C G T A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGTGCACTCC
RTACGTGC-----
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGTGCACTCC
GGACGTGC-----
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGTGCACTCC---
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGTGCACTCC
TACGTGCV----
 A C G T A C G T A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CGTGCACTCC--
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGTGCACTCC-
-AASCACTCAA
 A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGTGCACTCC---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGTGCACTCC--
GCCGCGCAGTGCGT
 A C G T A C G T A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGTGCACTCC------
AATCGCACTGCATTCCG
 A C G T A G T C A C T G A C G T A C T G A G T C C G T A A G T C A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G