Information for 24-AGCAGTCACGGTCTCT (Motif 41)

C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G C G T A A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C T G A G T C A C G T
p-value:1e-3
log p-value:-8.547e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 24.9bp
Average Position of motif in Background65.5 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AGCAGTCACGGTCTCT--
----GTCACGCTCNCTGA
 C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGCAGTCACGGTCTCT
---AGTCACGC-----
 C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCAGTCACGGTCTCT
ACCACTCTCGGTCAC-
 C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCAGTCACGGTCTCT
AGTATTCTCGGTTGC-
 C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGCAGTCACGGTCTCT
NNAATTAGTCACGGT----
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGTCACGGTCTCT
NNNCAGCTGTCAATATN---
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.51
Offset:8
Orientation:forward strand
Alignment:AGCAGTCACGGTCTCT----
--------AGGTCTCTAACC
 C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGCAGTCACGGTCTCT-
---AGTTTCGGTTTCGN
 C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAGTCACGGTCTCT
NTNNNAGGAGTCTCNTN----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGCAGTCACGGTCTCT
----NTCAAGGTCA--
 C G T A A C T G A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T