Information for 18-GTCCTTACARCAG (Motif 38)

A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A G T C A C G T A C T G G A C T C G T A C G T A A C T G A C T G G T C A A G T C
p-value:1e-5
log p-value:-1.357e+01
Information Content per bp:1.881
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 28.9bp
Average Position of motif in Background70.5 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GTCCTTACARCAG-
----TTGCAACATN
 A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTCCTTACARCAG-
--SCTGTCARCACC
 A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G A C G T
A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTCCTTACARCAG
---ATTGCATCAT
 A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G
A C G T A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTCCTTACARCAG
---ATTGCATCAK
 A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G
A C G T A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTCCTTACARCAG
BNTGDCCTTG------
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTTACARCAG
TGACCTTGAN----
 A C G T A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTCCTTACARCAG
-SCCTAGCAACAG
 A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GTCCTTACARCAG
NNGCACCTTTCTCC--
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTCCTTACARCAG----
--CCACACAGCAGGAGA
 A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTTACARCAG
TGACCTTGAV----
 A C G T A C T G A C G T A G T C A G T C A C G T A C G T C G T A A G T C C G T A C T A G A T G C C G T A A C T G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T