Information for 15-CACAACTAATCGA (Motif 33)

A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.564e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.7 +/- 23.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CACAACTAATCGA-
-----CTAATCGNT
 A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

CUX2/MA0755.1/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CACAACTAATCGA---
------TAATCGATAA
 A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

CUX1/MA0754.1/Jaspar

Match Rank:3
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CACAACTAATCGA---
------TAATCGATAA
 A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

PH0108.1_Msx3/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACAACTAATCGA---
CAAAACCAATTAATTT
 A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PAX7/MA0680.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CACAACTAATCGA---
------TAATCGATTA
 A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CACAACTAATCGA
ATGTCACAACAACAC--
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CACAACTAATCGA
-----NTAATTGN
 A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

PAX3/MA0780.1/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CACAACTAATCGA---
------TAATCGATTA
 A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACAACTAATCGA
ACCGTGACTAATTNN
 A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CACAACTAATCGA-----
----NNTAATCCNGNCNN
 A G T C C G T A A G T C C G T A C G T A A G T C A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A