Information for 1-KAAAGAAAAG (Motif 21)

C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G
Reverse Opposite:
A T G C A G C T A G C T A C G T C A G T T G A C A G C T A G C T G A C T G T A C
p-value:1e-8
log p-value:-1.877e+01
Information Content per bp:1.652
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif8.19%
Number of Background Sequences with motif1254.3
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets45.9 +/- 26.2bp
Average Position of motif in Background50.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-KAAAGAAAAG-
AGAAACGAAAGT
 A C G T C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:KAAAGAAAAG
AAAAGTCAA-
 C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

Gata1/MA0035.3/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:KAAAGAAAAG--
-ANAGATAAGAA
 C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G A C G T A C G T
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:KAAAGAAAAG-
---AGATAAGA
 C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G A C G T
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KAAAGAAAAG-
NNGAGATAAGA
 C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G A C G T
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:KAAAGAAAAG-
-AAAGTAAACA
 C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:KAAAGAAAAG-
-WAAGTAAAYA
 C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G A C G T
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----KAAAGAAAAG--------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-KAAAGAAAAG-
GAAASYGAAASY
 A C G T C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KAAAGAAAAG-
-AAAGTAAACA
 C A T G C T G A T C G A C T G A A C T G G T C A T G C A T C G A C T G A T A C G A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A