Information for 7-BTCCTTGRAAGGA (Motif 19)

A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A
Reverse Opposite:
A G C T G A T C G A T C A G C T A C G T A G C T T A G C C G T A C G T A C T A G A C T G G T C A T G A C
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.603
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif4.87%
Number of Background Sequences with motif471.8
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets54.6 +/- 21.1bp
Average Position of motif in Background51.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:BTCCTTGRAAGGA
----TTGACAGC-
 A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:BTCCTTGRAAGGA
GNCTATAAAAGG-
 A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:BTCCTTGRAAGGA
--ACWTCAAAGG-
 A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-BTCCTTGRAAGGA---
TATAGATCAAAGGAAAA
 A C G T A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:BTCCTTGRAAGGA
--ACATCAAAGG-
 A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-BTCCTTGRAAGGA
TGACCTTGAN----
 A C G T A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-BTCCTTGRAAGGA---
TATAGATCAAAGGAAAA
 A C G T A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:BTCCTTGRAAGGA-
--ACATCAAAGGNA
 A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A A C G T
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:BTCCTTGRAAGGA
----TTGACAGG-
 A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:BTCCTTGRAAGGA-
AAAGATCAAAGGAA
 A C T G C A G T T G A C A G T C G C A T A C G T A T C G T C G A T G C A C T G A C T A G C T A G C T G A A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A