Information for 13-AGGTGKTRAGGMDRGA (Motif 17)

C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A
Reverse Opposite:
A C G T A G T C G A T C G A T C A C T G A G T C G A T C A G C T G A C T G T C A T G A C A G T C T G C A A G T C A G T C A C G T
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.734
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif46.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets35.1 +/- 20.6bp
Average Position of motif in Background46.8 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGTGKTRAGGMDRGA
AGGTGTTAAT------
 C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGTGKTRAGGMDRGA
AAGGTGTKAA-------
 A C G T C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGTGKTRAGGMDRGA
TAGGTGTGAAG------
 A C G T C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.54
Offset:8
Orientation:forward strand
Alignment:AGGTGKTRAGGMDRGA---
--------GGGCGGGAAGG
 C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGTGKTRAGGMDRGA
AGGTGTGAAA------
 C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:9
Orientation:forward strand
Alignment:AGGTGKTRAGGMDRGA---
---------GGCGGGAARN
 C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGGTGKTRAGGMDRGA
AAGGTGTGAAA------
 A C G T C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGKTRAGGMDRGA
AACAGGTGNT---------
 A C G T A C G T A C G T C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGGTGKTRAGGMDRGA
AGGTGTCA--------
 C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGGTGKTRAGGMDRGA
AAGGTGTGAA-------
 A C G T C G T A A C T G T A C G A C G T A C T G A C T G A C G T C T G A C T G A C T A G A C T G G T A C C T A G C T A G A C T G C G T A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T