Information for 12-CTSTGMMWKGMTGYAY (Motif 15)

A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T
Reverse Opposite:
C T G A A C G T C T A G A G T C C G T A A C T G A G T C G T A C C G T A A C T G A C G T A G T C C G T A A T G C C G T A A T C G
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.809
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.4 +/- 24.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTSTGMMWKGMTGYAY
GCTGTG-----------
 A C G T A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTSTGMMWKGMTGYAY
CTGTTCCTGG------
 A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTSTGMMWKGMTGYAY--
-NNNNNATTGATGNGTGN
 A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T A C G T A C G T
A C G T A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CTSTGMMWKGMTGYAY-
-------MTGATGCAAT
 A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:CTSTGMMWKGMTGYAY-
-------ATGATGCAAT
 A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.46
Offset:-10
Orientation:forward strand
Alignment:----------CTSTGMMWKGMTGYAY
GAGCCTGGTACTGWGCCTGR------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:CTSTGMMWKGMTGYAY
---TGATTGGCTANN-
 A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--CTSTGMMWKGMTGYAY
TGCTGTGATTT-------
 A C G T A C G T A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-CTSTGMMWKGMTGYAY
GTCATGCHTGRCTGS--
 A C G T A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.45
Offset:-1
Orientation:reverse strand
Alignment:-CTSTGMMWKGMTGYAY
CCTTTGATGT-------
 A C G T A T G C A C G T A T C G A C G T A C T G G T C A G T A C C G A T A C T G A C T G G T A C C G A T A C T G A G T C C G T A A G C T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T