Information for 7-GKGRCATGCATGKAYW (Motif 10)

A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A
Reverse Opposite:
C G A T C T G A A C G T T G A C A G T C C G T A A C G T A C T G A G T C C G T A A G C T A C T G A G C T A T G C G T C A A T G C
p-value:1e-9
log p-value:-2.240e+01
Information Content per bp:1.859
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 15.3bp
Average Position of motif in Background53.0 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GKGRCATGCATGKAYW
NNTNTCATGAATGT---
 A C G T A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GKGRCATGCATGKAYW---
----YATGCATATRCATRT
 A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GKGRCATGCATGKAYW--
-ANTNTTACATGTATNTA
 A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A A C G T A C G T
A C G T C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GKGRCATGCATGKAYW
GACCACATTCATACAAT
 A C G T A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GKGRCATGCATGKAYW
-----ATGMATATDC-
 A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A
A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GKGRCATGCATGKAYW---
--AAAATACATGTAATACT
 A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GKGRCATGCATGKAYW----
NGGGCATGTCTGGGCATGTT
 A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GKGRCATGCATGKAYW----
NGGGCATGTCTGGGCATGTT
 A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GKGRCATGCATGKAYW---
--AATATACATGTAATATA
 A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GKGRCATGCATGKAYW---
--AAAATACATGTAAAAAT
 A T C G A C G T A T C G C T G A A G T C C T G A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T C G T A A C G T A C G T A C G T
A C G T A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T