Information for 1-KGGCGCCAYCTAGTGG (Motif 1)

C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G
Reverse Opposite:
A G T C A G T C C T G A A T G C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T A G A T G C A G T C G T C A
p-value:1e-81
log p-value:-1.878e+02
Information Content per bp:1.785
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif10.32%
Number of Background Sequences with motif153.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets53.4 +/- 21.2bp
Average Position of motif in Background50.9 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-KGGCGCCAYCTAGTGG---
ANAGTGCCACCTGGTGGCCA
A C G T C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:KGGCGCCAYCTAGTGG---
TAGCGCCCCCTGGTGGCCA
C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---KGGCGCCAYCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
A C G T A C G T A C G T C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:KGGCGCCAYCTAGTGG
-GCCGCCATCTTG---
C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:KGGCGCCAYCTAGTGG
-GCNGCCATCTTG---
C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:KGGCGCCAYCTAGTGG
----GCCATCTGTT--
C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:KGGCGCCAYCTAGTGG
----ACCATCTGTT--
C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--KGGCGCCAYCTAGTGG
GGTCCCGCCCCCTTCTC-
A C G T A C G T C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:KGGCGCCAYCTAGTGG
----GCCAGCTGBTNB
C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G
A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-KGGCGCCAYCTAGTGG
NNGGCGACACCTCNNN-
A C G T C A G T T C A G A T C G A G T C A C T G A G T C A G T C G T C A A G C T A G T C A C G T C G T A A T C G A G C T A C T G A C T G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T