Information for 11-CACATCAAGCCAT (Motif 17)

A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A G T C A C G T A C G T A T C G C G T A A C G T A C T G A C G T A C T G
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 27.9bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CACATCAAGCCAT
---ATCACCCCAT
 A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CACATCAAGCCAT
---ATCACCCCAT
 A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACATCAAGCCAT
-CCATCAATCAAA
 A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T
A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CACATCAAGCCAT
---ATCACCCCAC
 A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACATCAAGCCAT
-CNGTCACGCCAC
 A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CACATCAAGCCAT----
-------GGCCATTAAC
 A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CACATCAAGCCAT-
TCACCCATCAATAAACA
 A C G T A C G T A C G T A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CACATCAAGCCAT----
CAAATCCAGACATCACA
 A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CACATCAAGCCAT
------CAGCC--
 A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CACATCAAGCCAT
GAGCACAGCAGGACA-
 A C G T A C G T A C G T A G T C C G T A A G T C G T C A A C G T A T G C G T C A C G T A A C T G A G T C A G T C C G T A A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T