Information for 1-GTAGGCRTCMCTT (Motif 5)

A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T
Reverse Opposite:
C T G A G T C A C A T G C A T G A C T G G T C A A G T C C T A G A G T C G T A C A C G T T C G A G T A C
p-value:1e-12
log p-value:-2.907e+01
Information Content per bp:1.762
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.9 +/- 18.6bp
Average Position of motif in Background54.1 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTAGGCRTCMCTT-
CAAAGGCGTGGCCAG
 A C G T A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTAGGCRTCMCTT-
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTAGGCRTCMCTT--
TNNNNGGTGTCATNTNT
 A C G T A C G T A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTAGGCRTCMCTT
CNAGGCCT-----
 A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTAGGCRTCMCTT
TTCACGCATGAGTT
 A C G T A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTAGGCRTCMCTT--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTAGGCRTCMCTT-
GCGGAGGTGTCGCCTC
 A C G T A C G T A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTAGGCRTCMCTT
--AGGTGTCA---
 A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTAGGCRTCMCTT--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTAGGCRTCMCTT
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T A C T G A G C T C G T A A C T G A C T G A G T C C T A G A C G T A G T C G T A C G A T C A C G T A G C T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T