Information for 13-TATGTWTGYTMATCCT (Motif 24)

G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T
Reverse Opposite:
C G T A C T A G C T A G C T G A C G A T A C G T C G T A C T G A T A G C C G T A C G A T C G T A A G T C G T C A A C G T C G T A
p-value:1e-8
log p-value:-2.044e+01
Information Content per bp:1.753
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 23.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATGTWTGYTMATCCT
CTCATGAATATTCAT---
 A C G T A C G T G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TATGTWTGYTMATCCT
GAATGTTTGTTT-----
 A C G T G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TATGTWTGYTMATCCT
-------GCTAATCC-
 G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TATGTWTGYTMATCCT-
-------NYTAATCCYB
 G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

POU3F4/MA0789.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TATGTWTGYTMATCCT
----TATGCAAAT---
 G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TATGTWTGYTMATCCT
--------TTAATCCT
 G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TATGTWTGYTMATCCT-
NSTGTTTRCWCAGBNNN
 G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TATGTWTGYTMATCCT-----
----NTTGTTAATCCCTCTNN
 G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TATGTWTGYTMATCCT
--------TTAATCCC
 G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:TATGTWTGYTMATCCT
--------YTAATCCY
 G C A T G T C A A C G T A C T G A C G T C G T A C G A T A C T G A G C T A C G T G T C A C G T A A G C T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C