p-value: | 1e-8 |
log p-value: | -2.044e+01 |
Information Content per bp: | 1.848 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.64% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 54.2 +/- 23.8bp |
Average Position of motif in Background | 63.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.8 |
Multiplicity (# of sites on avg that occur together) | 2.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAGAGRTCACAACGGG -AGRGGTCA------- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GAGAGRTCACAACGGG --AAGGTCAC------ |
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PB0118.1_Esrra_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GAGAGRTCACAACGGG GGCGAGGGGTCAAGGGC-- |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GAGAGRTCACAACGGG TCTCAAAGGTCACGAG--- |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAGAGRTCACAACGGG NTNNNGGGGTCANGNNN-- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GAGAGRTCACAACGGG -TRAGGTCA------- |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GAGAGRTCACAACGGG TCTCAAAGGTCACCTG--- |
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ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAGAGRTCACAACGGG- AADGAGVCANYASTACAGNC |
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Rarg(var.2)/MA0860.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GAGAGRTCACAACGGG--- --AAGGTCACGAAAGGTCA |
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Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAGAGRTCACAACGGG ANGNAAAGGTCA------- |
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