Information for 10-TAAGGATCTCCAG (Motif 22)

A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G C G T A A C T G C T G A A C G T G T A C A G T C A C G T A C G T C T G A
p-value:1e-9
log p-value:-2.089e+01
Information Content per bp:1.927
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.6 +/- 20.8bp
Average Position of motif in Background64.0 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAAGGATCTCCAG
-AAGGATATNTN-
 A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TAAGGATCTCCAG-------
GAAGTANCACGAATNMRAGT
 A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TAAGGATCTCCAG
NTAATGAGCT----
 A C G T A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGGATCTCCAG
NNAATTAATGACCNNN--
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TAAGGATCTCCAG
NNATAAGGNN------
 A C G T A C G T A C G T A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TAAGGATCTCCAG
GTTAATTANCTCNN-
 A C G T A C G T A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TAAGGATCTCCAG---
CATAAGACCACCATTAC
 A C G T A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PH0050.1_Hoxa3/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TAAGGATCTCCAG
ACTAATTANCNCNA-
 A C G T A C G T A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G
T C G A A G T C G A C T G T C A C G T A A C G T A C G T C T G A T A G C A G T C C A G T A G T C T C G A G T C A A C G T

GATA2/MA0036.2/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGGATCTCCAG
NCAGATAAGAANNN----
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---TAAGGATCTCCAG
GGTTAGAGACCT----
 A C G T A C G T A C G T A G C T C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T G T A C G T A C C G T A A C T G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T