Information for 10-TTATTCYAATCTTGCT (Motif 17)

A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
Reverse Opposite:
C T G A A C T G G A T C T C G A C T G A A C T G C G T A A G C T C G A T C T G A C T A G C G T A C G T A A C G T C G T A G T C A
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.733
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.8 +/- 26.8bp
Average Position of motif in Background45.6 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTATTCYAATCTTGCT
TATAATTATAATATTC--
 A C G T A C G T A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTATTCYAATCTTGCT
NCGTATTATAATCNTA--
 A C G T A C G T A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTATTCYAATCTTGCT
GCTAATTATAATTATC--
 A C G T A C G T A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTATTCYAATCTTGCT
NNTAATTATAATNANN--
 A C G T A C G T A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTATTCYAATCTTGCT
-NATTCAAAT------
 A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTATTCYAATCTTGCT
-TATGCAAAT------
 A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTATTCYAATCTTGCT
ATTATGCTAATTT----
 A C G T A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTATTCYAATCTTGCT
NNTTTTTCTTATNT----
 A C G T A C G T A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTATTCYAATCTTGCT
TTATGCAAATTA----
 A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTATTCYAATCTTGCT
-TATGCAAAT------
 A C G T G A C T G T C A A C G T A C G T A G T C A G C T C G T A C T G A A C G T T A G C G A C T A C G T C A T G A G T C G A C T
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T