p-value: | 1e-9 |
log p-value: | -2.286e+01 |
Information Content per bp: | 1.845 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.96% |
Number of Background Sequences with motif | 5.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 51.5 +/- 23.5bp |
Average Position of motif in Background | 53.7 +/- 13.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAGGATAGATTAH -ATGATKGATGRC |
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SD0003.1_at_AC_acceptor/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAGGATAGATTAH AAGGATATNTN-- |
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CUX1/MA0754.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AAGGATAGATTAH --NTATCGATTA- |
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Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AAGGATAGATTAH- ----ATTGATTYND |
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CUX2/MA0755.1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AAGGATAGATTAH --TTATCGATTA- |
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PH0125.1_Obox5_2/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AAGGATAGATTAH- NANAGGGATTAATTATN |
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ONECUT1/MA0679.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAGGATAGATTAH-- -ANTATCGATTTTTN |
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ONECUT2/MA0756.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAGGATAGATTAH-- -ATTATCGATTTTTT |
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DMRT3/MA0610.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAGGATAGATTAH NTTGATACATT-- |
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PBX1/MA0070.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAGGATAGATTAH TTTGATTGATGN- |
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