Information for 10-TGAATTGTCT (Motif 12)

A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T
Reverse Opposite:
C T G A A T C G C T G A A G T C C G T A C G T A A C G T A C G T A G T C C G T A
p-value:1e-5
log p-value:-1.358e+01
Information Content per bp:1.871
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif120.6
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets38.4 +/- 20.7bp
Average Position of motif in Background47.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0066.1_Sox17_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TGAATTGTCT--
NNATNAATTGTTTNN
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------TGAATTGTCT
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGAATTGTCT----
AAAATTGTTATGAA
 A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TGAATTGTCT----
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGAATTGTCT-----
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGAATTGTCT
CTCATTGTC-
 A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGAATTGTCT----
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T A C G T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATTGTCT
NNTNTCATGAATGT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGAATTGTCT-----
TTCAATTGTTCTAAAA
 A C G T A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGAATTGTCT---
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C T G C G T A C G T A C G A T A C G T C T A G A G C T A T G C A G C T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G