Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-194 | -4.472e+02 | 0.0000 | 220.0 | 30.43% | 724.0 | 1.84% | motif file (matrix) |
svg |
2 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-180 | -4.160e+02 | 0.0000 | 254.0 | 35.13% | 1302.7 | 3.31% | motif file (matrix) |
svg |
3 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-155 | -3.575e+02 | 0.0000 | 251.0 | 34.72% | 1615.2 | 4.11% | motif file (matrix) |
svg |
4 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-126 | -2.917e+02 | 0.0000 | 242.0 | 33.47% | 1969.2 | 5.01% | motif file (matrix) |
svg |
5 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-125 | -2.888e+02 | 0.0000 | 108.0 | 14.94% | 170.4 | 0.43% | motif file (matrix) |
svg |
6 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-122 | -2.822e+02 | 0.0000 | 342.0 | 47.30% | 4634.3 | 11.79% | motif file (matrix) |
svg |
7 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-103 | -2.388e+02 | 0.0000 | 205.0 | 28.35% | 1701.9 | 4.33% | motif file (matrix) |
svg |
8 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-101 | -2.326e+02 | 0.0000 | 254.0 | 35.13% | 2900.0 | 7.38% | motif file (matrix) |
svg |
9 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-99 | -2.286e+02 | 0.0000 | 219.0 | 30.29% | 2106.0 | 5.36% | motif file (matrix) |
svg |
10 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-96 | -2.233e+02 | 0.0000 | 200.0 | 27.66% | 1747.9 | 4.45% | motif file (matrix) |
svg |
11 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-92 | -2.129e+02 | 0.0000 | 156.0 | 21.58% | 1004.3 | 2.56% | motif file (matrix) |
svg |
12 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-82 | -1.896e+02 | 0.0000 | 274.0 | 37.90% | 4151.0 | 10.56% | motif file (matrix) |
svg |
13 |
| E-box(bHLH)/Promoter/Homer | 1e-76 | -1.763e+02 | 0.0000 | 86.0 | 11.89% | 256.4 | 0.65% | motif file (matrix) |
svg |
14 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-59 | -1.371e+02 | 0.0000 | 72.0 | 9.96% | 249.8 | 0.64% | motif file (matrix) |
svg |
15 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-41 | -9.629e+01 | 0.0000 | 120.0 | 16.60% | 1456.6 | 3.71% | motif file (matrix) |
svg |
16 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-38 | -8.880e+01 | 0.0000 | 70.0 | 9.68% | 484.0 | 1.23% | motif file (matrix) |
svg |
17 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-17 | -4.043e+01 | 0.0000 | 39.0 | 5.39% | 356.4 | 0.91% | motif file (matrix) |
svg |
18 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-17 | -3.934e+01 | 0.0000 | 46.0 | 6.36% | 520.2 | 1.32% | motif file (matrix) |
svg |
19 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-15 | -3.564e+01 | 0.0000 | 56.0 | 7.75% | 834.5 | 2.12% | motif file (matrix) |
svg |
20 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-14 | -3.241e+01 | 0.0000 | 12.0 | 1.66% | 20.0 | 0.05% | motif file (matrix) |
svg |
21 |
| CRE(bZIP)/Promoter/Homer | 1e-13 | -3.185e+01 | 0.0000 | 49.0 | 6.78% | 720.0 | 1.83% | motif file (matrix) |
svg |
22 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-13 | -3.086e+01 | 0.0000 | 56.0 | 7.75% | 937.2 | 2.38% | motif file (matrix) |
svg |
23 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-13 | -3.014e+01 | 0.0000 | 29.0 | 4.01% | 268.5 | 0.68% | motif file (matrix) |
svg |
24 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-12 | -2.834e+01 | 0.0000 | 48.0 | 6.64% | 764.6 | 1.95% | motif file (matrix) |
svg |
25 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-12 | -2.809e+01 | 0.0000 | 49.0 | 6.78% | 798.2 | 2.03% | motif file (matrix) |
svg |
26 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-11 | -2.739e+01 | 0.0000 | 61.0 | 8.44% | 1181.0 | 3.01% | motif file (matrix) |
svg |
27 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-10 | -2.436e+01 | 0.0000 | 53.0 | 7.33% | 1013.2 | 2.58% | motif file (matrix) |
svg |
28 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-10 | -2.435e+01 | 0.0000 | 123.0 | 17.01% | 3607.9 | 9.18% | motif file (matrix) |
svg |
29 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-9 | -2.204e+01 | 0.0000 | 55.0 | 7.61% | 1148.3 | 2.92% | motif file (matrix) |
svg |
30 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-6 | -1.549e+01 | 0.0000 | 164.0 | 22.68% | 6061.9 | 15.42% | motif file (matrix) |
svg |
31 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-5 | -1.377e+01 | 0.0000 | 38.0 | 5.26% | 857.5 | 2.18% | motif file (matrix) |
svg |
32 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-5 | -1.217e+01 | 0.0001 | 21.0 | 2.90% | 358.9 | 0.91% | motif file (matrix) |
svg |
33 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.193e+01 | 0.0001 | 198.0 | 27.39% | 8074.6 | 20.55% | motif file (matrix) |
svg |
34 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.108e+01 | 0.0002 | 76.0 | 10.51% | 2497.9 | 6.36% | motif file (matrix) |
svg |
35 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.071e+01 | 0.0002 | 51.0 | 7.05% | 1486.4 | 3.78% | motif file (matrix) |
svg |
36 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-4 | -1.050e+01 | 0.0003 | 57.0 | 7.88% | 1741.4 | 4.43% | motif file (matrix) |
svg |
37 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-4 | -1.045e+01 | 0.0003 | 67.0 | 9.27% | 2161.9 | 5.50% | motif file (matrix) |
svg |
38 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.033e+01 | 0.0003 | 64.0 | 8.85% | 2043.4 | 5.20% | motif file (matrix) |
svg |
39 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-4 | -9.997e+00 | 0.0004 | 57.0 | 7.88% | 1774.1 | 4.51% | motif file (matrix) |
svg |
40 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.992e+00 | 0.0004 | 49.0 | 6.78% | 1448.8 | 3.69% | motif file (matrix) |
svg |
41 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -9.917e+00 | 0.0004 | 80.0 | 11.07% | 2763.6 | 7.03% | motif file (matrix) |
svg |
42 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-4 | -9.902e+00 | 0.0004 | 99.0 | 13.69% | 3613.3 | 9.19% | motif file (matrix) |
svg |
43 |
| NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-4 | -9.295e+00 | 0.0008 | 11.0 | 1.52% | 143.3 | 0.36% | motif file (matrix) |
svg |
44 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -9.167e+00 | 0.0009 | 86.0 | 11.89% | 3096.1 | 7.88% | motif file (matrix) |
svg |
45 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -8.861e+00 | 0.0011 | 56.0 | 7.75% | 1811.6 | 4.61% | motif file (matrix) |
svg |
46 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.727e+00 | 0.0013 | 168.0 | 23.24% | 7026.6 | 17.88% | motif file (matrix) |
svg |
47 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-3 | -8.158e+00 | 0.0022 | 16.0 | 2.21% | 311.5 | 0.79% | motif file (matrix) |
svg |
48 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.996e+00 | 0.0026 | 46.0 | 6.36% | 1453.2 | 3.70% | motif file (matrix) |
svg |
49 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.845e+00 | 0.0029 | 30.0 | 4.15% | 820.4 | 2.09% | motif file (matrix) |
svg |
50 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -7.843e+00 | 0.0029 | 28.0 | 3.87% | 744.8 | 1.90% | motif file (matrix) |
svg |
51 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.813e+00 | 0.0029 | 40.0 | 5.53% | 1218.4 | 3.10% | motif file (matrix) |
svg |
52 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -7.644e+00 | 0.0034 | 78.0 | 10.79% | 2882.4 | 7.33% | motif file (matrix) |
svg |
53 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.102e+00 | 0.0057 | 34.0 | 4.70% | 1019.7 | 2.59% | motif file (matrix) |
svg |
54 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.641e+00 | 0.0088 | 95.0 | 13.14% | 3783.2 | 9.63% | motif file (matrix) |
svg |
55 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -6.521e+00 | 0.0097 | 38.0 | 5.26% | 1222.0 | 3.11% | motif file (matrix) |
svg |
56 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.514e+00 | 0.0097 | 4.0 | 0.55% | 26.4 | 0.07% | motif file (matrix) |
svg |
57 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-2 | -6.457e+00 | 0.0100 | 196.0 | 27.11% | 8791.9 | 22.37% | motif file (matrix) |
svg |
58 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.345e+00 | 0.0110 | 105.0 | 14.52% | 4298.7 | 10.94% | motif file (matrix) |
svg |
59 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.088e+00 | 0.0140 | 35.0 | 4.84% | 1127.9 | 2.87% | motif file (matrix) |
svg |
60 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.811e+00 | 0.0182 | 28.0 | 3.87% | 856.2 | 2.18% | motif file (matrix) |
svg |
61 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.608e+00 | 0.0219 | 18.0 | 2.49% | 474.0 | 1.21% | motif file (matrix) |
svg |
62 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.539e+00 | 0.0231 | 52.0 | 7.19% | 1916.8 | 4.88% | motif file (matrix) |
svg |
63 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -5.427e+00 | 0.0254 | 25.0 | 3.46% | 758.3 | 1.93% | motif file (matrix) |
svg |
64 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.342e+00 | 0.0272 | 21.0 | 2.90% | 603.2 | 1.53% | motif file (matrix) |
svg |
65 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.284e+00 | 0.0280 | 6.0 | 0.83% | 84.8 | 0.22% | motif file (matrix) |
svg |
66 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.284e+00 | 0.0280 | 6.0 | 0.83% | 84.9 | 0.22% | motif file (matrix) |
svg |
67 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.250e+00 | 0.0285 | 173.0 | 23.93% | 7852.0 | 19.98% | motif file (matrix) |
svg |
68 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.179e+00 | 0.0302 | 32.0 | 4.43% | 1067.2 | 2.72% | motif file (matrix) |
svg |
69 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.168e+00 | 0.0302 | 27.0 | 3.73% | 858.0 | 2.18% | motif file (matrix) |
svg |
70 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -5.025e+00 | 0.0342 | 7.0 | 0.97% | 117.1 | 0.30% | motif file (matrix) |
svg |
71 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.858e+00 | 0.0398 | 79.0 | 10.93% | 3257.2 | 8.29% | motif file (matrix) |
svg |
72 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.738e+00 | 0.0443 | 18.0 | 2.49% | 518.9 | 1.32% | motif file (matrix) |
svg |
73 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -4.632e+00 | 0.0485 | 75.0 | 10.37% | 3097.3 | 7.88% | motif file (matrix) |
svg |
74 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -4.622e+00 | 0.0485 | 27.0 | 3.73% | 896.4 | 2.28% | motif file (matrix) |
svg |