Information for 10-CCCAACCACTCCATGA (Motif 21)

A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G C T C T A G A C T G T C G A A C T G A C G T A C T G A T C G C G A T A C G T A C T G A T C G A C T G
p-value:1e-5
log p-value:-1.380e+01
Information Content per bp:1.909
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 25.7bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCCAACCACTCCATGA
---MRSCACTYAA---
A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCAACCACTCCATGA
---AASCACTCAA---
A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCCAACCACTCCATGA
----NSCACTYVAV--
A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCAACCACTCCATGA
---AGCCACTCAAG--
A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCCAACCACTCCATGA
----ATCACCCCAT--
A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCCAACCACTCCATGA
----ATCACCCCAT--
A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCCAACCACTCCATGA
----RSCACTYRAG--
A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCCAACCACTCCATGA
---AAGCACTTAA---
A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCCAACCACTCCATGA
CCCCCGCCCCCGCC----
A C G T A C G T A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCCAACCACTCCATGA
YCCGCCCACGCN----
A G T C A T G C A G T C G T C A C G T A A T G C A G T C C G T A A G T C A C G T A G T C A G T C C T G A A C G T A C T G C G T A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T