p-value: | 1e-5 |
log p-value: | -1.380e+01 |
Information Content per bp: | 1.909 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.41% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 56.0 +/- 25.7bp |
Average Position of motif in Background | 69.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCAACCACTCCATGA ---MRSCACTYAA--- |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCCAACCACTCCATGA ---AASCACTCAA--- |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCCAACCACTCCATGA ----NSCACTYVAV-- |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCCAACCACTCCATGA ---AGCCACTCAAG-- |
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Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCCAACCACTCCATGA ----ATCACCCCAT-- |
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SREBF2/MA0596.1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCCAACCACTCCATGA ----ATCACCCCAT-- |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCCAACCACTCCATGA ----RSCACTYRAG-- |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCCAACCACTCCATGA ---AAGCACTTAA--- |
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EGR1/MA0162.2/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCCAACCACTCCATGA CCCCCGCCCCCGCC---- |
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Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCCAACCACTCCATGA YCCGCCCACGCN---- |
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