Information for 9-GCTGCTGCTCCTCCTC (Motif 17)

C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C
Reverse Opposite:
C T A G G T C A A C T G A C T G G T C A A C T G A T C G C G T A A C T G A T G C C G T A A C T G A G T C C T G A A C T G A G T C
p-value:1e-8
log p-value:-1.918e+01
Information Content per bp:1.869
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.4 +/- 26.0bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTGCTCCTCCTC
AGCAGCTGCTNN-----
 A C G T C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTGCTCCTCCTC
CTCAGCAGCTGCTACTG
 A C G T C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTGCTCCTCCTC
AGCAGCTGCT-------
 A C G T C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCTGCTGCTCCTCCTC--
----NAGCCCCGCCCCCN
 C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTGCTGCTCCTCCTC
--CGCAGCTGCG----
 C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCTGCTGCTCCTCCTC--
------GCTCCGCCCMCY
 C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCTGCTGCTCCTCCTC
-----CNGTCCTCCC-
 C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCTGCTGCTCCTCCTC
------GCTCGGSCTC
 C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

ZNF263/MA0528.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCTGCTGCTCCTCCTC-
TCCTCCTCCCCCTCCTCCTCC
 A C G T A C G T A C G T A C G T C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C A C G T
G A C T G A T C G A T C G A C T G A T C G A T C G A C T A G T C G A T C G A T C G A T C A G T C A G C T A G T C G T A C C G A T A T G C G T A C G A C T A G T C G A T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTGCTGCTCCTCCTC
NCAGCTGCTG------
 C T A G A G T C A G C T A C T G A G T C C G A T A T C G A G T C A C G T A T G C A G T C A C G T A G T C A G T C A C G T A G T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T