Information for 10-GATTTGCCAA (Motif 13)

T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A
Reverse Opposite:
A G C T A C G T A C T G C A T G A G T C G T C A G T C A C G T A A G C T A G T C
p-value:1e-10
log p-value:-2.330e+01
Information Content per bp:1.667
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif6.36%
Number of Background Sequences with motif825.1
Percentage of Background Sequences with motif2.10%
Average Position of motif in Targets40.9 +/- 27.3bp
Average Position of motif in Background49.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:GATTTGCCAA--
--GGTGCCAAGT
 T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GATTTGCCAA-
--CGTGCCAAG
 T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:GATTTGCCAA
----TGCCAA
 T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.75
Offset:3
Orientation:forward strand
Alignment:GATTTGCCAA-
---TTGCCAAG
 T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GATTTGCCAA--
---ATGCCAACC
 T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GATTTGCCAA--
---ATGCCCACC
 T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GATTTGCCAA-----
GGGTGTGCCCAAAAGG
 A C G T T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GATTTGCCAA------
ACTATGCCAACCTACC
 T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GATTTGCCAA--
----TGTCANYT
 T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATTTGCCAA-
-ATATGCAAAT
 T C A G T C G A C G A T A C G T A C G T A C T G G T A C T G A C G T C A T C G A A C G T
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T