Information for 7-GAGGRCATTGTTC (Motif 8)

C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C
Reverse Opposite:
C T A G G T C A G T C A A G T C C G T A G T C A C G A T A C T G G A C T G T A C A G T C A C G T A G T C
p-value:1e-13
log p-value:-3.110e+01
Information Content per bp:1.754
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.5 +/- 17.3bp
Average Position of motif in Background44.2 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GAGGRCATTGTTC
AGGVNCCTTTGT--
 A C G T C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.75
Offset:4
Orientation:forward strand
Alignment:GAGGRCATTGTTC-
----CCATTGTTYB
 C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.74
Offset:4
Orientation:forward strand
Alignment:GAGGRCATTGTTC-
----CCWTTGTYYB
 C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GAGGRCATTGTTC
---NCCATTGTTY
 C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.74
Offset:5
Orientation:forward strand
Alignment:GAGGRCATTGTTC
-----CTTTGT--
 C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.73
Offset:4
Orientation:forward strand
Alignment:GAGGRCATTGTTC-
----CCATTGTTNY
 C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C A C G T
A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GAGGRCATTGTTC-----
-CNNNTATTGTTCNNNNN
 C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GAGGRCATTGTTC-
----CCATTGTTTT
 C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GAGGRCATTGTTC
---NCCATTGTTC
 C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.71
Offset:6
Orientation:forward strand
Alignment:GAGGRCATTGTTC
------ATTGTT-
 C T A G G T C A A C T G A C T G C T G A G T A C C G T A A C G T A C G T A C T G A C G T C A G T G A T C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T