Information for 4-ATTTCAAAWATTT (Motif 5)

G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T
Reverse Opposite:
C G T A G T C A T C G A A G C T C G T A A G C T C A G T A C G T T A C G G C T A G T C A T G C A C A G T
p-value:1e-17
log p-value:-3.951e+01
Information Content per bp:1.711
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif123.7
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets50.5 +/- 26.0bp
Average Position of motif in Background56.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTTCAAAWATTT-
NNTNNCAATATTAG
 G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTTCAAAWATTT-
NNTNNCAATATTAG
 G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATTTCAAAWATTT
CAATTGCAAAAATAT
 A C G T A C G T G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATTTCAAAWATTT
CGGTTTCAAA-----
 A C G T A C G T G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTTCAAAWATTT
NATTCAAAT----
 G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTTCAAAWATTT
AAATAAGAAAAAAC-
 A C G T A C G T G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ATTTCAAAWATTT
-----AATTATT-
 G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATTTCAAAWATTT
ACATCAAAGG---
 G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATTTCAAAWATTT--
ATGGTTCAATAATTTTG
 A C G T A C G T G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATTTCAAAWATTT-
-GGTTAAACATTAA
 G T C A A C G T A C G T C A G T A T G C C G T A G C T A C T G A G C A T C T G A A G C T C A G T A C G T A C G T
A C G T C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A