Information for 8-CATGCCTGGC (Motif 15)

A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C
Reverse Opposite:
A C T G A G T C A T G C C G T A C T A G C T A G G T A C C G T A C G A T T C A G
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.827
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif393.9
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets47.5 +/- 27.4bp
Average Position of motif in Background50.1 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CATGCCTGGC
NNACTTGCCTT--
 A C G T A C G T A C G T A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CATGCCTGGC---
GTCATGCHTGRCTGS
 A C G T A C G T A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CATGCCTGGC
RCATTCCWGG-
 A C G T A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATGCCTGGC---
ACATGCCCGGGCAT
 A C G T A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CATGCCTGGC----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CATGCCTGGC
RCATTCCWGG-
 A C G T A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C
C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CATGCCTGGC---
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CATGCCTGGC
-AGGCCTNG-
 A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATGCCTGGC
-CTGTCTGG-
 A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CATGCCTGGC--
--GGTCTGGCAT
 A G T C G C T A C G A T A C T G A G T C A G T C C G A T A T C G C T A G T G A C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T