Information for 3-AGCTTGGCGC (Motif 6)

C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C
Reverse Opposite:
A C T G G A T C C T A G G T A C T G A C C T G A T C G A A C T G A T G C A G C T
p-value:1e-12
log p-value:-2.837e+01
Information Content per bp:1.839
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif198.5
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets49.9 +/- 27.4bp
Average Position of motif in Background51.3 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCTTGGCGC------
NNNNTTGGCGCCGANNN
 A C G T C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCTTGGCGC------
NNNNTTGGCGCCGANNN
 A C G T C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGCTTGGCGC
AAGCTTG----
 A C G T C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGCTTGGCGC-
--NTTGGCANN
 C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGCTTGGCGC----
--TTTGGCGCCAAA
 C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGCTTGGCGC
---TTGGCA-
 C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCTTGGCGC-
-NNTTGGCANN
 C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCTTGGCGC---
NNGCNCTGCGCGGC
 A C G T C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C A C G T A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGCTTGGCGC
NNNNCAACCTTCGNGA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCTTGGCGC-
-DTTTCCCGCC
 C T G A A T C G A G T C A G C T A G C T A C T G A C T G A G T C C T A G G T A C A C G T
A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C