Information for 4-GCTCTGGCTCCCTGSC (Motif 5)

A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G G T A C C T G A A T C G A C T G A C T G C G T A A C T G A T G C T G A C T C G A A C T G C G T A A C T G A T G C
p-value:1e-12
log p-value:-2.917e+01
Information Content per bp:1.840
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 25.5bp
Average Position of motif in Background56.5 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCTCTGGCTCCCTGSC
GCTCGGSCTC------
 A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GCTCTGGCTCCCTGSC
------GCTCCG----
 A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTCTGGCTCCCTGSC-
---CTGGCAGNCTGCCA
 A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTGGCTCCCTGSC
GGCTCYAKCAYC-----
 A C G T A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCTCTGGCTCCCTGSC
-GTCACGCTCNCTGA-
 A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCTCTGGCTCCCTGSC
GGTCCCGCCC------
 A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCTCTGGCTCCCTGSC---
---TTGGCANNNTGCCAAG
 A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCTCTGGCTCCCTGSC
-----NGCTN------
 A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCTCTGGCTCCCTGSC-
-----CGCCCCCTGACA
 A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTGGCTCCCTGSC
TGCGCAGGCGC------
 A C G T A T C G A G T C A C G T A G T C A C G T A C T G A T C G A G T C A C G T A G T C T G A C A T G C A G C T A C T G A T G C A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T