Information for 10-CKCTCYCCTGCKYSSA (Motif 28)

A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A
Reverse Opposite:
A C G T A T C G A T G C C T G A T G A C A C T G A G T C C G T A A C T G A C T G C T G A A T C G C G T A A C T G T G A C A C T G
p-value:1e-7
log p-value:-1.612e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 25.2bp
Average Position of motif in Background24.0 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CKCTCYCCTGCKYSSA
-CCTCACCTG------
 A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CKCTCYCCTGCKYSSA
--NNCACCTGNN----
 A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CKCTCYCCTGCKYSSA
-SNGCACCTGCHS---
 A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CKCTCYCCTGCKYSSA
---CCCCCTGCTGTG-
 A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CKCTCYCCTGCKYSSA--
---TCNCCTGCTGNGNNN
 A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CKCTCYCCTGCKYSSA
-GGCCYCCTGCTGDGH
 A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CKCTCYCCTGCKYSSA
--CGCACCTGCT----
 A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A
A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CKCTCYCCTGCKYSSA--
---TNTCCTGCTGTGNNG
 A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CKCTCYCCTGCKYSSA
---TCCCCA-------
 A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A
A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CKCTCYCCTGCKYSSA
--AACACCTGCT----
 A G T C A C T G A G T C A C G T A T G C A G C T A G T C A G T C A C G T A C T G A G T C A C T G A G C T A T C G A T G C C G T A
A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T