Information for 11-GCCACTGGCAGCCAGT (Motif 24)

C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A G T A C A C G T A C T G A C T G A G T C C G A T A C T G A T G C G T A C C G T A A C T G C G A T A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 30.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCACTGGCAGCCAGT
CAATCACTGGCAGAAT--
 A C G T A C G T C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCACTGGCAGCCAGT--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCCACTGGCAGCCAGT--
----CTGGCAGNCTGCCA
 C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCCACTGGCAGCCAGT
AGCCTCAGGCA------
 A C G T C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCCACTGGCAGCCAGT
CGCCTCAGGCA------
 A C G T C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:GCCACTGGCAGCCAGT
---------TGCCAA-
 C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCCACTGGCAGCCAGT
---VBTGWCAGCB---
 C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCCACTGGCAGCCAGT
ACCACATCCTGT----
 C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GCCACTGGCAGCCAGT--
------ACTAGCCAATCA
 C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCCACTGGCAGCCAGT
AGCCTCAGGCA------
 A C G T C T A G A G T C A G T C C G T A A G T C A C G T A C T G A T C G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T