Information for 14-TTTAAGGCTG (Motif 23)

A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G
Reverse Opposite:
A G T C C G T A T A C G A T G C A G T C G C A T A G C T C T G A T G C A C T G A
p-value:1e-8
log p-value:-1.969e+01
Information Content per bp:1.834
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif81.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets61.6 +/- 22.1bp
Average Position of motif in Background48.1 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAGGCTG
TTTTATGGCTN
 A C G T A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGGCTG
DGWTTTATGRCN-
 A C G T A C G T A C G T A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTTAAGGCTG-
NGANTTTTATGGCTCN
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TTTAAGGCTG-
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAGGCTG
NTTTTATGAC--
 A C G T A C G T A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAGGCTG
TTTTATTGC--
 A C G T A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGGCTG
TGATTTATGGCC-
 A C G T A C G T A C G T A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTAAGGCTG
NTGATTTATGGCC-
 A C G T A C G T A C G T A C G T A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGGCTG
TGATTTATGGCC-
 A C G T A C G T A C G T A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTAAGGCTG--
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C G T A G C T A C G T A G C T C T G A C G T A A C T G A T C G A G T C C G A T C T A G A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A