Information for 13-TTGGCCGGTA (Motif 21)

C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A
Reverse Opposite:
A C G T G T C A A G T C G T A C C T A G A C T G A G T C A G T C G T C A C G T A
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.857
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif33.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.8 +/- 22.9bp
Average Position of motif in Background51.1 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGGCCGGTA
TTGGCA----
 C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCGGTA
NTTGGCANN--
 A C G T C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCGGTA-
TTTGGCGGGAAA
 A C G T C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A A C G T
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

E2F7/MA0758.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCCGGTA--
TTTTGGCGGGAAAA
 A C G T A C G T C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A A C G T A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCCGGTA
TGATTGGCTANN-
 A C G T A C G T A C G T C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCCGGTA
CCGATTGGCT----
 A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTGGCCGGTA-
BTKGGCGGGAAA
 A C G T C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCCGGTA---
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTGGCCGGTA
--GGCVGTTR
 C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCCGGTA
NNTTGGCANN--
 A C G T A C G T C G A T A C G T A C T G A C T G A G T C A G T C C A T G A C T G A C G T T G C A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T