Information for 6-GGCCRCAAGA (Motif 8)

C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A
Reverse Opposite:
A G C T A G T C C G A T G C A T T C A G G A T C A T C G C T A G A G T C G A T C
p-value:1e-13
log p-value:-3.041e+01
Information Content per bp:1.751
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif103.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets49.9 +/- 29.9bp
Average Position of motif in Background52.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGCCRCAAGA-
-GTCACATGAY
 C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A A C G T
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCCRCAAGA-
GGTCACATGAC
 C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A A C G T
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCRCAAGA---------
TGGCCACCAGGTGGCACTNT
 A C G T C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCCRCAAGA-
GGTCACGTGGC
 C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A A C G T
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCCRCAAGA--------
TGGCCACCAGGGGGCGCTA
 A C G T C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

E-box(bHLH)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCCRCAAGA
CCGGTCACGTGA
 A C G T A C G T C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCCRCAAGA
AAACCGCAA--
 A C G T C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCCRCAAGA
AAACCGCAAA-
 A C G T C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

TFEC/MA0871.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCCRCAAGA-
-ATCACGTGAC
 C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A A C G T
A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCCRCAAGA
AAACCACAGAN
 A C G T C T A G C T A G A G T C A T G C C T A G A G T C C G T A C G T A C T A G C T G A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C