Information for 15-CCTGACCTTACTA (Motif 22)

G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A
Reverse Opposite:
A G C T C T G A A C T G A G C T T C G A C G T A A C T G A C T G A C G T A G T C C G T A A C T G A C T G
p-value:1e-4
log p-value:-1.143e+01
Information Content per bp:1.842
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.6 +/- 25.9bp
Average Position of motif in Background47.9 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTTACTA
--TGACCTYA---
 G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTTACTA
--TGACCT-----
 G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTTACTA
-GTGACCTT----
 G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTTACTA
--TGACCTTGAT-
 G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCTGACCTTACTA
--TGACCYCT---
 G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTGACCTTACTA
-NTGACCTTGA--
 G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCTGACCTTACTA
CGGTGACGTCAC--
 A C G T G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTGACCTTACTA
NNACTTACCTN----
 A C G T A C G T G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCTGACCTTACTA
-CTGACCTTTG--
 G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCTGACCTTACTA-
NNCNTGACCCCGCTCT
 A C G T A C G T G T A C A G T C A C G T A C T G C G T A A G T C G T A C A C G T A C G T C T G A A G T C A G C T C T G A A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T