Information for 13-TGAGATKTTAATG (Motif 20)

A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G
Reverse Opposite:
G T A C C G T A C A G T A C G T G T C A C G T A G T A C C G T A A C G T G T A C C G A T A G T C C T G A
p-value:1e-5
log p-value:-1.196e+01
Information Content per bp:1.730
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif49.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets54.4 +/- 26.7bp
Average Position of motif in Background51.0 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGAGATKTTAATG--
----ATATTAATTAA
 A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGAGATKTTAATG----
-NNANTTTTATTGGNNN
 A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGAGATKTTAATG
--AGGTGTTAAT-
 A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGAGATKTTAATG-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGAGATKTTAATG
TGCTGTGATTT-----
 A C G T A C G T A C G T A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGAGATKTTAATG----
-NNAATTTTATTGGNTN
 A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G A C G T A C G T A C G T A C G T
A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAGATKTTAATG----
NTNAATTTTATTGNATT
 A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGAGATKTTAATG
CNGTGATTTN----
 A C G T A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGAGATKTTAATG-
----NTTTTATTGG
 A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PH0150.1_Pou4f3/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGAGATKTTAATG-----
--AGTTATTAATGAGGTC
 A G C T C T A G C G T A A C T G G T C A A C G T C A T G A C G T A C G T G T C A G C T A G A C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C